PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.M5YJC
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 366aa    MW: 39986.4 Da    PI: 8.3976
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.M5YJCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding262.1e-08252291340
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqc 40 
                      +W++e d ll d+v+++G g+W+tIa+  +   +Rt+kq+
      Aradu.M5YJC 252 AWSEEKDNLLRDVVQRFGEGHWATIAKGGNvpVKRTAKQI 291
                      7**************************9888899***998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.225245301IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-8246294IPR009057Homeodomain-like
SuperFamilySSF466893.88E-7248294IPR009057Homeodomain-like
PfamPF002498.6E-7252291IPR001005SANT/Myb domain
CDDcd116603.73E-7253294No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MKPMLLPGGC FALVEGRAGK PCMWIQLACQ IGRGIRMLPC PCGGQGNVVM VRPSCAPKLP  60
CCACWPCQFV CHAPRNAALP STRAEQRKLS LFLGEVPSSK LAGWLLLPLF SWFSWCQGSA  120
WSLASSRSCV QSLEESETAL EEGRAEIFLL SFLGLELCSA LKEGRAVMII SLSESTPSSS  180
TIEAPLTIHA SVCNSSKTSN KGIQSSSLMQ RTEIIFLVTI KRQTLPAVSL TDNIKIKGLD  240
GSNMASKKRK IAWSEEKDNL LRDVVQRFGE GHWATIAKGG NVPVKRTAKQ IDQKKYVIRG  300
SNGCKVGDDN NSLVLMWEDG FCQGRSASLV EDMDGGGEDL VRKAFSKMSI QLYNYGEGWL  360
PPEWTD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.22e-07MYB_related family protein